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A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Self-Buffering system for Cost-Effective production of lactic acid from glucose and xylose using Acid-Tolerant Issatchenkia orientalis
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics … include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science … of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … But today, you have so many other say morphological, genetic, you know say sugar, lipid composition – so I think …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … robust high-yielding feedstock plants, using advanced genetic technology to accelerate the domestication of …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or …
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