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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust … tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … are. And now, imagine the base of the ecosystem is changing from cold water, eukaryotic phytoplankton …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled … genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … The work conducted by the U.S. Department of Energy Joint Genome Institute …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … Plant microbiomes hold the amazing ability to influence plant …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and … Episode Transcript … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for … Episode Transcript … This is our conversation with Professor Ben Shen, from The Scripps Research …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … Beyond providing a scalable solution for production of high-quality fungal …
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Sphagnum physiology and changing climate
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Microbial Ecology in a Changing Climate
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