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Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … it’s important to me to tell their stories too. If you have one of those stories, or want to suggest someone, reach out … sequencing do we need to do? MARC: Well, we should never stop sequencing otherwise I’d be unemployed.  DAN: Likewise. …

… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … data for further microbial research and applications. One key program goal is focused on establishing data driven … genomes from three domains of life. It provides tools for analyzing the functional capability of microbial communities …

… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … circles in some way or another. But today, we have someone who, weirdly, I haven’t, I think, ever been in a room … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific … was going to stand the test of time.” … C. reinhardtii on PhycoCosm … C. zofingiensis on Phytozome … Algal Datasets … …

… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … linked those species-level observations with data on microalgal communities across different ocean latitudes from pole … data from JGI CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   … The U.S. …

… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … species and plant-microbe interactions, advancing efforts to create renewable energy sources and bolster … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant …

For the first time, a team analyzes the transcriptomes of a … clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  MycoCosm (for the …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … products based conferences where– are you doing like a workshop potentially for like undergrads, grad students, …

… and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … metabolite biosynthesis, synthesizing and biochemically analyzing enzymes to support mission-driven research. Rapid …

… it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … the in the 50s 60s 70s, most of the exploration of this is done by what’s called “find and grind”. So you would find … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

… innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … metagenome workflow . mSystems 6(3). 10.1128/MSYSTEMS.00804-20 Nayfach S et al.  A Genomic Catalog of Earth’s …