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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data … for microbiome data science, and the development of new informatics tools specifically optimized for … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Frequently Asked Questions: Project Management
… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public projects on the JGI Genome Portal . The PI and all authorized users can also generate … of publicly available projects can be accessed via the Genome Portal , at the following sites: Microbes: IMG …
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Natural Prodcast Episode 9: Roger Linington
… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … if we’re finding an audience outside of just us. If you’re new to natural products science, please let me know! I’m … the algorithm had done was actually accurate. And so we told people that if they would curate 1000 entries, that that …
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Natural Prodcast Episode 12: Nadine Ziemert
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … the texture is kind of like– Dan, do they look like a mold, like a fungi or so? DAN UDWARY: Not really. They’re …
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Natural Prodcast Episode 16: Marcy Balunas
… they must be chemically protected in some way and lo and behold it’s this bacteria. And so the ANMG is depositing the … in how the community itself works together to elicit new metabolite production. And we are also interested in how … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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Genome Insider
… The Genome Insider podcast brings listeners into the science …
Learn more
Products
… Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … finished product depend on genome. Selected genomes will be improved based on feasibility and scientific merit Assembly, … Assembly, annotation ( IMG/M ), binning 154/217 Metagenome Improved Draft Long-read assembly & annotation of …
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Natural Prodcast Episode 18: A CSP Primer
… and we wish her all the best. Later on, I’ll introduce my new co-host, who I’m really excited to be working with, and … Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … what kinds of research to support and conduct. I already told you what a CSP is, but one other program I think we …
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … moved there in the early ’60s from Berkeley to work on this new budding field of marine natural products. And was at the … at all those art history photos of the, you know, various old buildings in in Rome didn’t quite do it for me. And at …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … period data will be made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) … generation. The data will not be publicly available in JGI portals or outside repositories until the earliest of three …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … have a better understanding of what is what. This is not new. It actually was first proposed by two authors called … No matter what you look at, we will always find a new way on how to do the Krebs cycle. There are microbes …
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