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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access to high-throughput … Commercialization Fund projects … To set up a call or meeting to discuss partnering opportunities, contact  Brooke …
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Metagenome Program
… tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential …
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Natural Prodcast Episode 20: Brian Bachmann
… which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … recorded a few months ago at the SIMB Natural Products meeting and it’s time to get this podcast rolling again. … and Analogues” And links to the abstracts for the SIMB posters we mentioned at the end: Henry Schares:  …
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Natural Prodcast Episode 7: Ben Shen
So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … to make the technology available to the broad – the common scientific community. And that also goes true for the … chairing this great conference. And let’s go look at some posters. BEN:  Great! Thank you very much for having me. …
Learn more
Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users … If your project makes it successfully through the scientific review and is selected, we will provide you with …
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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … or metabolomics should apply to one of the JGI’s  calls for user proposals . … The JGI is inviting researchers using the … their strains for sequencing, as long as they have a scientific question that is relevant to DOE missions.  Learn …
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Natural Prodcast Episode 23: Aaron Puri
Alison has done a really nice job of providing that general scientific audience whereas now I’m sitting here with two … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … learn as much about it as possible starting with we picked 183 of them. And we sent that list to the Joint Genome …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Data Ecosystem
… will be the development of tools and infrastructure for microbiome data science, and the development of new … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales … in microbiome data science. … National Energy Research Scientific Computing Center … DOE System Biology …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to … of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of the … technical feasibility and readiness to begin work.  During scientific peer review, proposals are evaluated and placed …
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Partners
… facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data infrastructure … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … problems.  The mission of the National Energy Research Scientific Computing Center ( NERSC ) is to accelerate …
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