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Single Cell Research Group
… Selected Publications …
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Natural Prodcast Episode 11: Marnix Medema
… the quantity is up to standard, and maybe it gives you some feedback as a developer. And then when it’s, well, when the … think this is a good idea. I support it and I get critical feedback to get something off the ground that you can show … something like that. So in this case, it means providing feedback on the platform, on how it’s set up, on the …
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Plant Program
… current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing … grasses and fast-growing trees as renewable energy feedstocks. It also tackles challenges posed by … use as a model for grasses used to produce biomass, food, feed and forage because it is well-suited to experimental …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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Natural Prodcast Episode 1: The Primer, Part 1
… got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to … the RSS link , and via most other commonly-used podcast feeds. Please subscribe, and leave a review! If you have … , or by email to [email protected] . We’d love to get your feedback! …
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Mining Metagenomes for Cas Proteins
… aa. They were initially identified by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It … out that some of these were shorter than the typical Cas12d proteins and were also found next to cas1 genes. Further … the US Department of Energy under contract no. DE-AC02-05CH11231. The work was supported in part by grants from the Paul …
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Natural Prodcast Episode 22: Alison Narayan
… account? Or do you and your lab focus mainly on what can we feed this and what can it actually turn over? ALISON … using ancestral sequence reconstruction”,  PNAS.  2023,  120, e2218248120. doi : 10.1073/pnas.2218248120 …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces …
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Industry Engagement Program
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Natural Prodcast Episode 8: Eric Schmidt
… in their environment and eating them. They’re filter feeders that have a really important role on the reef and … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Plant Microbial Interactions Group
… 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 … Selected Publications …
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