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Natural Prodcast Episode 11: Marnix Medema
… of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we … I’m going to start. We talked about this when we did the primer episode, we talked about genome mining through some …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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Natural Prodcast Episode 12: Nadine Ziemert
Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … of organisms, so things like the NRL database - or online catalog, I guess. So we've also been able to get …
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Natural Prodcast Episode 8: Eric Schmidt
… can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … you describe the project. Could you just give a short primer for someone who is familiar with biology, but not … And that’s related to what my project is with the JGI. Where, it’s again, with ribosomal peptides, we’re …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … including traits useful for adapting to harsh conditions. 2019: JGI and collaborators analyze the sweet sorghum RIO …
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Natural Prodcast Episode 4: Nancy Keller
… from the University of Wisconsin. Like we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … I know it’s early on, but you do have a project with the JGI. It’s doing some some fungal genome sequencing, I …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by citations for field and … EcoGenomics & Applications (VEGA) Symposium series. The online seminars foster discussion on how to best capture and …
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JGI & KBase at PAG XXVII
Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to …
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