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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Natural Prodcast Episode 12: Nadine Ziemert
… Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 5: Brad Moore
… enjoyed what he was doing so I wanted to be part of that discovery, and that magic that he was showing, and in his … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … Paul Jensen and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they …
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Natural Prodcast Episode 15: Katherine Duncan
… marine natural products, as such, but things like “Silent Spring” by Rachel Carson, and things about understanding the … in Antarctica on a ship. Yeah, so I went to Antarctica in 2018 as a participant in Homeward Bound 2, last year as … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Natural Prodcast Episode 4: Nancy Keller
… from the University of Wisconsin. Like we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … I know it’s early on, but you do have a project with the JGI. It’s doing some some fungal genome sequencing, I …
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JGI-TMF Critical Minerals and Materials Call
… integrate genomics with nanoscale science, accelerating discoveries and developing transformative bio-based … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the …
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Natural Prodcast Episode 8: Eric Schmidt
… that usually lead to surprises and really great discoveries! And Eric’s done an awesome job, in that respect. … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … you describe the project. Could you just give a short primer for someone who is familiar with biology, but not …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem with a …
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