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…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science …

… responsibility for all material transfers. *University of California Campus : An Appendix for the synthesis proposal …

… neither the United States Government nor the University of California nor any of their employees, makes any warranty, … by the United States Government or the University of California. The views and opinions of authors expressed … … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …

… large populations of bacteria and archaea in their natural environments using single cell approaches. This … to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 type strains. These … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow . mSystems 6(3). 10.1128/MSYSTEMS.00804-20 Nayfach S et al.  A Genomic …

… community.  We focus our efforts on integrating database mining and sequence design with scaling the production of …

… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for … 20 members from 15 institutions 300+ students 800+ iNaturalist observations All MycoEd protocols, course …

… solve energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. …

Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …

… al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …