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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in … with functional annotation, taxonomic classification, and microbial host predictions.  … The Mycocosm web portal …
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and … and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto …
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Natural Prodcast Episode 11: Marnix Medema
… you to get a bird’s-eye perspective on the biosynthetic diversity element of these genomes. And you see how they’re– … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …
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Natural Prodcast Episode 12: Nadine Ziemert
… see. So it doesn’t seem to be a correlation between biodiversity in taxa and biodiversity in secondary metabolites. So stuff like that, I …
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FICUS Overview
… aims to encourage innovative research exploiting a diversity of capabilities. Previously, researchers had to …
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
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Natural Prodcast Episode 23: Aaron Puri
… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … compounds like methanol and methane. And I really dove into microbial physiology and microbial genetics, and really away … the answer would be that there’s actually a great deal of diversity within these methanotrophs for example, that are …
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Sulfide Generation by Dominant Halanaerobium Microorganisms in Hydraulically Fractured Shales
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Natural Prodcast Episode 9: Roger Linington
… program, which stands for International Cooperative Biodiversity Groups, and it’s this great program funded by the … to try and create an open source database of all known microbial natural products. So if you think about natural … products science as a field, we have arguably been studying microbial natural products in an ordered way for perhaps 80 …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial … Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at different depths. In … related 16S rRNA genes, but these genes mask the striking diversity of their genomic capabilities. According to Boeuf, …
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Project Management Office
Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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