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… partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … cycle. During regular web conferences, various JGI subject matter experts walked the class through the workflow and all …

… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in … with functional annotation, taxonomic classification, and microbial host predictions.  … The Mycocosm web portal …

… what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … effect is gone. You can transplant the effect by taking the microbial fraction out of one soil, transplanting it into …

… now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  MARCY: Yes. So I would …

Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we …

… in natural products as an undergrad. So for me, it was studying sort of the interface of chemistry and biology … I mean, you’re in Northern California, and it doesn’t matter where they are. You still get the air. Air is not … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …

A deep dive into microbial genomics reveals one bacterial species is made of … blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 …

… missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …

… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-437. Hess et al. 2011. Metagenomic …

… to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …