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Into the darkness: the ecologies of novel ‘microbial dark matter’ phyla in an Antarctic lake
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Insights into the phylogeny and coding potential of microbial dark matter
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The protein structurome of Orthornavirae and its dark matter.
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
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Unraveling the functional dark matter through global metagenomics
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … environmental solutions, fostering a bioeconomy powered by nature’s resources. … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify … Data Science group . Shining a Light on Functional ‘Dark Matter’ Microbial communities living everywhere from soils …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … one of his email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  …
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