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Micro-Scale Applications Group
Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … have suggestions for others feel free to let me know by emailing [email protected], or reaching out on Twitter to … there. So once you could sequence DNA, then it was just a matter of time before some secondary metabolism gets …
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Machine learning sheds light on microbial dark proteins
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority of microbes in, …
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Game On: High School Students Drive Everglades Metagenomics Study
… partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … cycle. During regular web conferences, various JGI subject matter experts walked the class through the workflow and all …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … the production of the natural product. So that was my PhD study, and then towards the end of my PhD study, then …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you … record and send us a question that we might play on air, email us at [email protected] .    And because we’re a User …
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Tanja Woyke
… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-437. Hess et al. 2011. Metagenomic …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… in natural products as an undergrad. So for me, it was studying sort of the interface of chemistry and biology … I mean, you’re in Northern California, and it doesn’t matter where they are. You still get the air. Air is not … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in …
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