Search

… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and start …

Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … teaching materials and bioinformatics exercises … Beyond providing a scalable solution for production of … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The …

The mission of the Joint Genome Institute is to serve the scientific community as … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … me towards the secondary metabolism side of things was looking at genomes and seeing where the really hard things … before. DAN: Yeah, yeah, fun stuff.  MARC: And we call that whole thing, the “chemistry hub”, and that’s centered right …

The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …

… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … biology analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new … 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

… state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … finding new sources is somewhat problematic. And there’s a whole process to this, that can be really time consuming … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …

… had some food for them which of course, I couldn’t feed the whole school.    ALISON: Where was this?   NANCY: This was … tissues, different structures, different spores. I like looking at that I’m a very visual person. So, when we make … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … now. Maybe you want to describe that.  ALISON: Okay. We’re looking at a schematic of different pathways in a microbial …