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User Support
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … will also consult with you to resolve any issues that may arise. You may monitor the status of your sequencing …
Learn more
Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … structures is obviously very valuable. From my perspective, JGI has a large database of biosynthetic gene clusters and … two problems there. One is that even though your molecule may be deposited in a repository, if the acquisition …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission …
Learn more
Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene … insights into the impact of microbial symbionts and their hosts on ecosystems.   Environmental molecular network:   …
Learn more
Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … under standard laboratory conditions by their native hosts. We are developing cell-free based systems to express … JGI researcher Dan Udwary hosts this “fireside chat”-style podcast about natural …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … of the journal in which the research is published. The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … Paul Jensen and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they … like a good lesson.  Dan: So one of the things – I mean, maybe I’m more aware of it having worked for you, but I have …
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Natural Prodcast Episode 4: Nancy Keller
…   NANCY: My pleasure.   DAN: I guess I wanted to start, maybe just by asking you how did you get into the field of … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … I know it’s early on, but you do have a project with the JGI. It’s doing some some fungal genome sequencing, I …
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Natural Prodcast Episode 12: Nadine Ziemert
… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … ZIEMERT: Yes. DAN UDWARY: I think that was one of the JGI’s early moves into sequencing things for the purpose of … ago was this? NADINE ZIEMERT: It wasn’t that long ago, but maybe 2006, 2007, or something like that. And we actually …
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Natural Prodcast Episode 1: The Primer, Part 1
… welcome to the first episode of Natural Prodcast. First, maybe, a little bit of background. My name is Dan Udwary. I … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … questions or comments, you can contact us on Twitter at @JGI or @danudwary , or by email to jgi[email protected] . We’d …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about the terminology we use and where it falls short, and maybe what we should be saying to be more clear about what … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Natural Prodcast Episode 17: Cassandra Quave
… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … enjoying their pumpkin spice lattes of the season. They may be shocked to know that some of those key ingredients, … podcast hear me say this every third podcast or so. But JGI, our focus as a DOE, Department of Energy, user facility …
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