Search

The JGI’s Metabolomics Program works to uncover the roles of … a controlled environment of plant, microbes, fungi, etc may be established and subject to repeatable, controlled … insights into the impact of microbial symbionts and their hosts on ecosystems.   Environmental molecular network:   …

…   NANCY: My pleasure.   DAN: I guess I wanted to start, maybe just by asking you how did you get into the field of … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … I know it’s early on, but you do have a project with the JGI. It’s doing some some fungal genome sequencing, I …

… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any … should not exceed 3 Tb in total. Proposals for this call may be submitted at any time as brief white …

The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in … Data Collective.        … Learn more about our work at the JGI:  …

… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … ZIEMERT: Yes. DAN UDWARY: I think that was one of the JGI’s early moves into sequencing things for the purpose of … ago was this? NADINE ZIEMERT: It wasn’t that long ago, but maybe 2006, 2007, or something like that. And we actually …

… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … Paul Jensen and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they … like a good lesson.  Dan: So one of the things – I mean, maybe I’m more aware of it having worked for you, but I have …

… welcome to the first episode of Natural Prodcast. First, maybe, a little bit of background. My name is Dan Udwary. I … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at …

… about the terminology we use and where it falls short, and maybe what we should be saying to be more clear about what … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …

… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … enjoying their pumpkin spice lattes of the season. They may be shocked to know that some of those key ingredients, … podcast hear me say this every third podcast or so. But JGI, our focus as a DOE, Department of Energy, user facility …

… you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and … at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a year, a full gene …

… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time using a simple …

The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible … — they’ll help us build a solid knowledge base that may inform future updates to one (or more) of the JGI …