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Natural Prodcast Episode 15: Katherine Duncan
… until I was back at University, so it must be about a month, a month and a half later. In September, I went to a … what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … was adjacent to what I worked on, but my experience of how microbes are interacting in the environment like, like my …
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Natural Prodcast Episode 20: Brian Bachmann
… you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk … been sitting on all these great interviews recorded a few months ago at the SIMB Natural Products meeting and it’s … them on a regular basis. So they are full of terrestrial microbes. So they’re open ecosystems. They’re not sealed off …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is …
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Partnerships Development Team
… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … institutions who haven't yet partnered with the JGI. The Business Development Team works closely with the … to high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Natural Prodcast Episode 2: The Primer, Part 2
… we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … why we are still sequencing lots of stuff, and why the JGI is a key driver in some of the science. ALISON: Very …
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Natural Prodcast Episode 11: Marnix Medema
… our bedroom together with us still while she’s still four months old. So it’s not a bad location for a little baby. … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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Natural Prodcast Episode 17: Cassandra Quave
… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … and take soil and discover a new important drug from the microbes in that soil, there are now international … or terrestrial biodiversity hotspots that we have on Earth, most of those occur in nations that have very poor …
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Natural Prodcast Episode 7: Ben Shen
… for Episode 7 of the Natural Prodcast. It’s been about a month now since we dropped our first six episodes, and now … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … to the Primer episodes, then you heard me talk about JGI’s Earth Secondary Metabolome initiative, and our collaboration …
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Natural Prodcast Episode 12: Nadine Ziemert
… product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a … . You should know we’ve recorded this a few months ago when we were at the height of the initial spread … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …
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