Search

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … that there’s a lot of fragmented — identifiable BGCs but highly fragmented, in most of the metagenome sequences that …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … and being able to do those predictions. So we’re pretty excited about where these next few years are gonna take us. …

… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome structure …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … integrated metabolism, by Firn and Jones, because it’s highly tightly integrated in order to lead to the final … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …

… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … metabolites using cultures. And one of the reasons we’re excited about it is because we can see new chemistry …

… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … are natural sequences, and we chose several of them to be highly related to enzymes that we have been studying since …

… Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … for a long time, he said, guess what, I’m going to give you nine months of salary and a lousy job with no future. And …

… The JGI has diverse capabilities in: DNA and RNA sequencing, … as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … outputs for each product. For custom requests not on this list, or to discuss experimental design for a proposal, we …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable …

… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … amazing.  NIGEL MOUNCEY: Yeah. And the ag industry is highly regulated and that drives a lot of the timeline.  …

… Below are a list of webinars that can help you through the submission … here . You can find additional webinars covering how to use our data portals here.  …