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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship … Modeled on the JGI-UC Merced internship program, a similar collaboration …
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FICUS Overview
… initiative was established in 2014 to encourage and enable researchers to more easily integrate the expertise and … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … (WIP) interface.    For commonly asked questions about JGI’s proposal calls and proposal submission, as well as … The “User” signing the JGI User Agreement will be an authorized representative from …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … only exists through the energy and enthusiasm of young researchers, so it’s important to me to tell their stories … per year number. And very quickly, we’re getting really excited about January, we’re having our new crop of partner …
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Data Policy
… the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … of data to support their use by those generating data. The JGI Data Policy applies to research data and analysis … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of … progress in the Design-Build-Test-Learn cycle, helping researchers optimize genetic systems. By enabling these … The JGI's DNA Synthesis Science Group supports researchers exploring how to convert sequence into …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new … Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank … through our systems, we build far-reaching communities of researchers to bring down barriers to productivity.   …
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Natural Prodcast Episode 12: Nadine Ziemert
… mining and the directions it might take in the future. I highly recommend it. I’ll link to it in the show notes. … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … sound like that was initially something that you were excited about doing? NADINE ZIEMERT: Now, that’s all I do all …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … outputs for each product. For custom requests not on this list, or to discuss experimental design for a proposal, we …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super excited about this thing, and I hope you will be too. If this … that there’s a lot of fragmented — identifiable BGCs but highly fragmented, in most of the metagenome sequences that …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …
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JGI-TMF Critical Minerals and Materials Call
… and Materials call represents a unique opportunity for researchers to request the capabilities and expertise of … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the …
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