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… These are both protocols that we do not have yet in production, so we're not … with single organisms and mixed cultures of fungi, algae, protists, bacteria, archaea, viruses, plants, including … microbial communities and plant-microbe interactions. However, you are encouraged to reach out to the JGI or …

… institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank enables predictive ecosystem biology. The … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …

… How To Create an Annotated GenBank File There are several … How To Use ApE To save your ApE file as a Genbank file, …

… (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for … team will have expertise in this area, or can demonstrate how competencies can be built. We recommend exploring how KBase (www.kbase.us) can support biological data …

… No. However, the JGI does maintain a list of protocols, found in our HERE (TK) , used successfully by investigators in the past.  These protocols are not endorsed by and have not been validated by … products may be appropriate alternatives. See specific protocols within the Sequencing Sample Overview file in our …

… webinars here . You can find additional webinars covering how to use our data portals here.  …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake … of the Asia-Australia region. Overall, pangenome analysis showed significantly more genetic diversity in wild Lentinula …

… published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 … Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …

… Maize produces a family of compounds that protects it against infections — using surprisingly few … to find. Zealexins are produced in every corn variety and protect maize by fending off fungal and microbial infections. … the bioenergy crop switchgrass. The team confirmed just how important zealexins are to maize health. Infections with …

… of this symbiosis at the cellular level — really understand how those two cell types [of two different organisms] are … and the mycorrhizal fungi  Rhizophagus irregularis. To see how these organisms cooperate, this team applied  R. …

… broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to … how fungi that feed on decaying plant matter (saprotrophs) have transitioned to the symbiotic lifestyle. The … There are three types of fungal saprotrophs in the forest. White rot can break down the cellulose, hemicellulose, and …