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Programs & Platform Leads
… a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of … Please review our FAQ in advance of contacting the PMO office.  …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of … algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. …
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CSP Large Scale Call
… focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … pathogens will only be considered if they are of relevance to bioenergy-related feedstock crops or model plants. …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps … natural products and secondary metabolism, and talking to the scientists who do the work to understand all of the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … then you can begin– it sounds like homology. Because I’m getting confused with the idea of– FRANCISCO BARONA-GOMEZ: … Dr. Francisco (Paco) Barona- Goméz is a Principal Investigator at Cinvestav UGA-Langebio in Irapuato, Mexico. His …
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Products
… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw …
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Doubling Down on Known Protein Families
… exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … at least double.  “As we keep on adding more samples, we’re getting more protein families,” Kyrpides said. “In a few …
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Potential for functional divergence in ectomycorrhizal fungal communities across a precipitation gradient
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Plant Program User Advisory Committee
… The Plant Program Advisory Committee is chartered to offer advice, guidance and counsel on the effective … and quality. The Committee does not perform management functions nor does it direct the Program's management team …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans … that produce most secondary metabolites. If you’d like to read more about this, I highly recommend his publication …
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