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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, … Science Programs and draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences …
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Sequencing Technologies
Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to users.  … …
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Genome‐based evolutionary history of Pseudomonas spp
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … aims to encourage innovative research exploiting a diversity of capabilities. Previously, researchers had to …
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Root Exudates Alter the Expression of Diverse Metabolic, Transport, Regulatory, and Stress Response Genes in Rhizosphere Pseudomonas
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … backbones, and so that’s our specialty. That’s where most diversity of life on earth is located. ALISON:  Have you …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … see. So it doesn’t seem to be a correlation between biodiversity in taxa and biodiversity in secondary metabolites. … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … was less nutrients but enough that you had a lot of biodiversity. So we choose environments that are close enough … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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Synthesis
… automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA … CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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