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Project Management Office
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Offerings & Capabilities
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Microbiome Data Science Team
… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . …
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Products
Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … library types and quality of finished product depend on genome. Selected genomes will be improved based on …
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Natural Prodcast Episode 23: Aaron Puri
And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me … was isolated from Svalbard Norway so right there by the Arctic Circle. But the strain that I ended up working with …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … in the uptake and transport of diverse substrates, and also photosynthesis genes including potential light-driven proton …
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Distinct and rich assemblages of giant viruses in Arctic and Antarctic lakes
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as … Jensen G. J., Kyrpides N. C., Koonin E. V., Woyke T . Giant viruses with an expanded complement of translation system …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … oils as biofuel. After analyzing the original sequence, Gary Stacey of the University of Missouri said he and his … soybean genome sequence and ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs on Earth. And at their base are microscopic, photosynthetic algae. But human-induced climate change , a … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … water to sample algal communities along transects in the Arctic Ocean, North Atlantic Ocean, South Atlantic Ocean and …
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