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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have … countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley … operations and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer … objectives for the JGI’s data science, informatics and information technology (IT) activities and strategic plan. … …
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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … at  naturalprodcast.com , along with transcripts and more information about all of the topics we cover. OK. Long intro … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … R., … Banfield J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans … National Lab. You can find links to transcripts, more information on this episode, and our other episodes at …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… thing I can point people to when it comes to getting out information about both SMC, and Jackie, so please do hop over … not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear …
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Phytozome: a comparative platform for green plant genomics
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … play a critical role in sequestering carbon and mitigating greenhouse gas emissions, and understanding how to improve …
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