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Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular … An assay used for profiling transcription factor binding sites across entire genomes. This … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. Despite … Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration …
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Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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Plant Microbial Interactions Group
… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … science as a woman and with a physical disability, you’re gonna love it and enjoy it and learn a ton. And for those of us who already work in natural …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … address challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal … capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field …
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Draft genome of five Cupriavidus plantarum strains: agave, maize and sorghum plant-associated bacteria with resistance to metals
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort … have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, … who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life …
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