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Frequently Asked Questions: Project Management
… pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find … address, click the “Request email change” link. This will generate an email that will go to an administrator to … IMG/M   (citation: https://doi.org/10.1093/nar/gkaa939 Fungi: Mycocosm (citation: …
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Genome Insider
… — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …
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Natural Prodcast Episode 15: Katherine Duncan
I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … is more exciting than going to, looking at Antarctica, and finding stuff that is new, new species, and then looking at … products, it’s such a great community to be in. And all the major advances have been because people have pulled together …
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Products
… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … alignment files 384/454 Fungal Transcriptome RNA for expression profiling and genome annotation (single …
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JGI Portals
… host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database … and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced … available sequenced algal genomes and genome annotations generated by the JGI and by others. The web portal allows …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … (transcriptomes) from their soil samples. This gene expression dataset was particularly important for … ignoring these difficult potential foodstuffs. The team’s findings also illustrate what’s happening on a spatial …
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Metagenome Program
… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom interfaces and … We leverage  genome-resolved metagenomics and targeted gene searches to expand representation of uncultivated …
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Natural Prodcast Episode 22: Alison Narayan
… crossover, where us genome miners get really jazzed about finding enzymes that do unusual or unprecedented chemistry. … all of these molecules. We know very little about what the majority of them do. We have in-depth biological studies on … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: …
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Natural Prodcast Episode 9: Roger Linington
… products community listening to itself talk, or if we’re finding an audience outside of just us. If you’re new to … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
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Combinatorial Regulation of Endothelial Gene Expression by Ets and Forkhead Transcription Factors
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