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Comparative genomics of biotechnologically important yeasts
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Synthetic hybrids of six yeast species
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Recreating Stable Brachypodium hybridum Allotetraploids by Uniting the Divergent Genomes of B. distachyon and B. stacei
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Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design
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Long-term CRISPR locus dynamics and stable host-virus co-existence in subsurface fractured shales
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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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Expanding Virophage Diversity
… genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic … Scientific Computing Center (NERSC) , which is supported by the Office of Science of the U.S. Department of Energy.   …
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Genetic dissection of interspecific differences in yeast thermotolerance
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Oleaginous Yeast Biology Elucidated With Comparative Transcriptomics
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Transcriptional Responses to Priority Effects in Nectar Yeast
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Rex Malmstrom
… bacterial cells and amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. … genomes of uncultured microbes.  His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that … al. 2023. A standardized quantitative analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role … Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome … Facility, for publicly available metagenome data provided by the other study co-authors, and reconstructed from these …
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