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Natural Prodcast Episode 13: Francisco Barona Goméz
… usage. And I was recently challenged on that on Twitter by Francisco Barona-Gomez. And so he is here to, at least, … So that’s one interesting consideration to take into account once we talk about the definition. And the other … I mean, why is it that our organization is spending so much resources on energy and keeping alive a very complex …
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Single Cell Research Group
… focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … sequencing. … Jean-Marie Volland: Assistant Professor, UC Santa Barbara Esther Singer: Director of Product and Market …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its … so researchers around the world would have better, easier access to these viral genomes. The new database was called … and grades their quality based on completeness. Along with expanding the viral diversity that IMG/VR features, teams at …
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Natural Prodcast Episode 7: Ben Shen
… sequencing, synthesis and genome mining technology to help access complicated natural product gene clusters, and we’re … notes, and I’ll put up some structures and link to some resources you can use to get caught up, if you’re not … people all over the word who have a common interest, united by natural products, DAN: You guys have put together a …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… genetic differences and then expanded on on that knowledge by doing a second postdoc with Yi Tang at UCLA and then kind … products but just different tools and how to really access and manipulate these pathways to get new compounds. … So all of the data that will be in SMC comes from public resources. You can submit your own genomes or whatever you’d …
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User Support
… ). Once users are notified that their proposal has been accepted, the PMO will assist with initiation of work … your Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD … as needed: Provide additional requested information or resources to users Coordinate meetings with DOE JGI Science …
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A Complex Confection Decoded: Sugarcane Reference Genome
The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference … has been compared to putting together a puzzle without necessarily knowing the final image. In contrast, assembling the …
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New Lineages of Life Group
… available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of …
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Natural Prodcast Episode 23: Aaron Puri
… introduction in natural products, so I might just start out by asking you know how did you get started. I know you’re … And I really dove into microbial physiology and microbial genetics, and really away from chemistry and synthesizing … not to look at as many different ways as possible to access the chemical potential of these or any organisms. So …
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Natural Prodcast Episode 9: Roger Linington
Biodiversity Groups, and it’s this great program funded by the National Institutes of Health and the National … to build The Natural Product Atlas , or NPAtlas, a freely accessible natural products structure database, which is … words, we have invested an enormous amount of time and resources and money in studying this field. Yet we don’t …
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Natural Prodcast Episode 20: Brian Bachmann
… schedule, I’m committing to it, and you all can hold me accountable and yell at me if I slip again. My JGI coworkers … just– and then in terms of there’s sequencing an organism by shotgun, which is what we did, we didn’t even sequence … Antibiotics, yeah, to fight each other to over scarce resources. Yeah. BRIAN BACHMANN: Or to communicate. DAN …
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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