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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So … not only I say we were able to make use of it, but also the community can benefit from the technology. But even better, …
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JGI Accepts 17 Proposals for Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned soils in California and …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … research, and also to talk to the wider natural products community about what they need to advance their science, and … I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise …
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Examples: Successful LOIs & Submissions
… below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as … CSP Large-Scale LOI #2 … FICUS Example #2 …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … assemblies, gene annotations, and analyses available to the community at large. In most cases where the JGI provides …
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Offerings & Capabilities
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … materials. The proposal submission deadline is March 31, 2026 .  … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect …
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Abscisic acid supports colonization of Eucalyptus grandis roots by the mutualistic ectomycorrhizal fungus Pisolithus microcarpus
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Eucalyptus grandis AUX/INDOLE-3-ACETIC ACID 13 (EgrIAA13) is a novel transcriptional regulator of xylogenesis
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Products
… Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing … matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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