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… tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and … with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their studied … was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the 12,063 …

… ALISON: It sounds like it’s kind of like our endocrine system or hormones in a way too. Like in a maybe analogous … not recognize that this weird, fatty acid synthase kind of system, like, maybe this bacteria just makes fatty acids in … But… DAN: Yeah, there are a lot of ways to put together carbon molecules. Chemistry is pretty limitless. All right, …

… completion of work on all approved proposals within 36 months from the approved start date. Additional time …

… Tang at UCLA and then kind of really gained more of the bioengineering aspect with fungi, kind of going along the track … Great Salt Lake, which is a hypersaline terminal lake about 30 minutes away from campus. And we’re finding some really, … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, …

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …

… and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, … fitness and health. This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident … approach, we employ various omics technologies, strain engineering and experimental characterization methods, in …

… are important organisms. They play key roles in global carbon cycling, are sources of natural products, and have … responsible for these traits takes us closer to harnessing algae for bioenergy and the greater bioeconomy. … proteins. PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows …

… the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. … has already demonstrated CRAGE as a versatile engineering system that allows scientists to conduct genome-wide screens … together, microbes can be used to create compounds more efficiently than one strain could on its own.  In work …