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Natural Prodcast Episode 15: Katherine Duncan
… a whole list of things. So we have a Scripps background shared together, although I don’t think we overlapped. Kate … has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Natural Prodcast Episode 17: Cassandra Quave
… to write a book but based on your productivity and what was shared in the book, it seems like it’s par for the course. … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … And just because you do a field study in a location doesn’t mean that you’re going to have this massive economic …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique … are authoritative providers of data or capabilities in their respective subject area. … The NMDC is tackling …
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Natural Prodcast Episode 23: Aaron Puri
I would say are are still fairly unexplored in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. …
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Natural Prodcast Episode 11: Marnix Medema
… up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … and they would be connected by edges if the gene clusters shared at least a certain level of similarity. So if … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … of secondary metabolism research, and I hope to be able to share a few more stories from there as we go forward. And … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate … episode, hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big …
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, … of scientists over the years that have essentially devoted their life to collect microorganisms all over the world for …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … and receive instructions for how to access your data, share with collaborators, and coordinate publication with …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … coming out. And I’m wondering if you can just kind of share some information of– we’ll just call it your baby in …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in … undergraduate students from UC Merced recently had summer internships in Walnut Creek. These interns included …
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