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Microbial Program
… to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with … to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with … microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using …
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Plant Program
… capture atmospheric carbon, helping to regulate Earth's carbon balance, to exploring the genetic basis of … which can reduce dependence on fertilizers. The study of secondary metabolites enhances our understanding of natural compounds …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … Initially, my group really focused on marine actinobacteria. Then we moved into marine proteobacteria. Not a … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …
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Plant-Microbial Interactions Group
… cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Single Cell Research Group
… of microbial metabolism towards a minority of cultivated bacteria, still persists to date. Research Team    … … show that the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. … T ., Klenk H. P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree …
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Products
Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … assembly), DGE, alignment files 91/126 Metabolomics Polar metabolite analysis Relative abundance profiling of polar … analysis Relative abundance profiling of non-polar (e.g. secondary metabolites, lipids, etc) metabolites using …
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Programs & Platform Leads
Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access …
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Natural Prodcast Episode 17: Cassandra Quave
… a check-up on me. And I wonder how that intersects with bacterial bioprospecting that is often done, where we’re … I think one thing we do see is that generally, the major secondary metabolites are there, they just are going to be there in …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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Natural Prodcast Episode 7: Ben Shen
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for … And so that’s a big collection of natural product-producing organisms that Pfizer, you know, mined for years … origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from bacteria, there’s …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint …
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