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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …
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Secondary Metabolites Program
… by exploring the genetic pathways responsible for their synthesis. The Secondary Metabolites Program offers users … and refining experimental approaches to explore the synthesis and function of these biologically significant … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for …
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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … for comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER … of sequence data is required to qualify for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for … Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar metabolomics samples, …
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New Lineages of Life Group
… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Conservative taxonomy and quality assessment of giant virus genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. … tool for phylogenetic distance matrix analysis and genome grouping …
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Natural Prodcast Episode 11: Marnix Medema
… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked … least parts of the structures of the molecules that use biosynthesis is encoded by these gene clusters and figuring out …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … The DNA Synthesis Science Advisory Committee is chartered to offer … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Industry Engagement Program
… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information … access to cutting-edge capabilities including sequencing, synthesis and metabolomics. Many users rely on a …
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JGI Advisory Committee
… committees, such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and …
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … intern has been just the accessibility to an abundance of knowledge. There’s so many scientists here that are willing … you what they’re working on, and it helps you become more knowledgeable and well-rounded. Whether it’s something …
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