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JGI Portals
… Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any inconvenience. … the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …
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Project Management Office
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Disclaimer
… The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of … The JGI is not responsible for the contents of any off-site pages referenced. …
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Offerings & Capabilities
… their science by generating data in three overarching categories: DNA Sequencing , Biodesign and Metabolomics .  … JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and metabolomics. …
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Natural Prodcast Episode 16: Marcy Balunas
… almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … product isolation. And in listening to some of the other podcasts I will say that my experience with mass … to hear more science from her, check out her podcast Genome Insider. She talks to lots of great scientists outside of …
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Sequencing Technologies & Products
… end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and metabolomics … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … more about SIP metagenomics through our Micro-Scale Applications group. …
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Industry Engagement Program
… It will identify high-value partnerships among members that catalyze data flows and promote novel data applications. As a large-scale data generator, the JGI has a key … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … is told as part of a three-part series of our  Genome Insider podcast .    ( Subscribe to Genome Insider on  Apple Podcasts ,  Spotify or wherever you get your podcasts) …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … helps translate their genomic potential into practical applications, including sustainable biofuels, biomaterials, … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … DOM cycling. ENVnet can be used in your custom Python applications but highly recommend using the workflow in  GNPS2 .   …
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Products
… demand, and costs of current offerings in the JGI product catalog. As a result certain products have been  … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … detection, population analysis Text file of SNPs (incl location in genome, coding/vs non, syn vs non-syn aa change …
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New Lineages of Life Group
… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … full of novel genes ready to be tapped for downstream applications. … their impact on ecosystem function: We investigate the intricate networks of relationships between microbes and their …
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