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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company … has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . … , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. …
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Overview of Laboratory Workflows for Microbial Single-Cell Genomics
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Back in the Lab: the 2023 Summer Intern Experience
… This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave …
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User Support
… a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional … Program leads Solicit user feedback about your overall experience working with the JGI. Find out more about our …
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Natural Prodcast Episode 4: Nancy Keller
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … we’re going to be presenting some conversations we had with scientists in the field of natural products. So, it’s a … path. So my interest actually came from my Peace Corps experience. After I got my undergraduate degree, which was …
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An Integrated Computer-Aided Design and Manufacturing Workflow for Synthetic Biology
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Natural Prodcast Episode 1: The Primer, Part 1
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … metabolism – field, though, is real, and it’s a field with very real and truly amazing science with a long … is an area that was adjacent to what I worked on, but my experience of how microbes are interacting in the …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … These resources would provide the research community with the ability to address questions such as sphagnum’s … a carbon sink or a carbon source. These research results, building on the availability of genomic information from two …
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HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … to be able to ever predict that, do you think? From your experience with working with all these different kinds of … element that needs to be taken into consideration in building these models. And so I think that one of the …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … kinds of biology, one of the best things that we do is work with this really great group of biologists that know what … to cause those interactions to happen.  And that in our experience and others experience is great for helping the …
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ORT: A workflow linking genome-scale metabolic models with reactive transport codes.
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