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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … Metabolomics Program in …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … here is the very first episode we recorded. You’ll probably notice that the audio quality isn’t as good as what you’ll … it’s important to me to tell their stories too. If you have one of those stories, or want to suggest someone, reach out …
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How to Submit Sequencing Samples
… at the JGI. The quality of the starting material is one of the greatest predictors of a successful sequencing … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … be used to ship your samples to the JGI. Samples that have not been approved to ship or are not sent in JGI-supplied …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … as a community resource for comparative analysis and annotation of all publicly available genomes from three … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. … …
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The Power of One, Amplified
… mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … to isolate sequencing, i.e. when the targeted cells cannot be cultivated in the lab. What makes this particular … is akin to the structure of social media networks where one social media group may have a relatively constrained set …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The …
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI …
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable without the capabilities and … to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … a scalable solution for production of high-quality fungal reference genomes, this program is an important initiative … then sent to the JGI for genome sequencing, assembly and annotation. … The Mycocosm portal supports the annotation, …
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