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… on a team at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept … For sure.  MARC: We were basically, Dan and I and one other computational biologist were tasked with looking at, you … what that – what that means. I think it means I was the computational guy that wasn’t scared of putting gloves on. …

… navigate to the proposal info page using any of the below methods: Search the Genome Portal Navigate to the JGI Genome …

… was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … up now with JGI is we identified using some different computational methods a bunch of different syntheses that make quorum …

… in and around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using …

Metabolite annotation based on chemical standards or computational approaches. Relative abundance of identified … Metabolite annotation based on chemical standards or computational approaches. Relative abundance of identified … High quality draft assembly of long-read sequence data, computationally analyzed and improved.  Semi-manual. …

… large-scale comparisons of biosynthetic gene clusters: “ A computational framework to explore large-scale biosynthetic …

The Department of Energy's Computational Science Graduate Fellowship (DOE CSGF) program … worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship Program at …

Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. … the user to analyze these data with existing bioinformatic methods to bridge the gap from sequence to biology. …

… we’re doing. And using these together along with all of our computational tools to really build out much more of an … the products coming from these clusters. And then our computational work to link all this together and try to … at JGI. And we have two arms to the group. One is the computational work that Dan and our new hire, Drew Doering …

… them to sequencing data. At the workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) … simpler; instead of aligning sequences with popular, but computationally costly approaches such as BLAST and hidden … two vectors,” said Sevim.  While there are alignment-free methods for nucleotide searches, such as  Mash and  BBsketch …