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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Being a User Facility means that scientists from all over the world bring us big problems related to energy … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … “data” for the remainder of this policy) produced through all user projects accepted FY22 and later through the … away from producing use-restricted data. JGI proposals typically include multiple projects of different types which can …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … A more recent effort in the Woyke lab is therefore focused on the application of  function-driven single-cell … B.P., Tsiamis G., Sievert S.M., Liu W.T., Eisen J.A., Hallam S.J., Kyrpides N.C., Stepanauskas R., Rubin E.M., …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code throughout the entire event. All participants are expected to be familiar with this …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel … bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … when describing his science, which is kind of the hallmark or the philosophy of his group and I think in … darn cool to have that legacy and that running in your family. Dan: So tell me about that. What sparked it? I mean, …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … was finished with this phase, they found that the protein family diversity within this metagenomic space (the ‘unknown …
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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities be covered by the … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … microbes with Mohammad Alanjary and Tilmann Weber to be a really valuable piece that shaped my thoughts about the … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … history from this conversation about why the ocean was basically unexplored until the 70s, and how diving was the … studied two strains. One was a new order, and one was a new family. And these two microbes produced new alkaloids, …
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