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… with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …

… with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …

I think for Natural Prodcast, I think the question that generally comes up that people come to me asking like is– … tackle more functional questions. For example, we can synthesize a gene and then figure out what it might be doing … you have questions about project relevance or experimental protocols, contact Deputy for User Programs, Tanja Woyke , …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in …

DNA sequence – sequences for the genes that code for the proteins that produce secondary metabolites. Do you recognize … been shared for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise … or an enhancer, an activator, to go ahead and, and synthesize those genes within a model organism like E.coli , and …

Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . …

Fungi from herbivore poop make surprisingly complex … recently, O’Malley’s team has begun to understand the outsized role the fungi play in digesting plant material in … that these expressed genes translated into expected proteins. That work was done in collaboration with the …

… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether … the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … of multiple forest systems, this work sets up protocols and pipelines that other teams can use around the …

Black fungi are microscopic and mighty. They survive everywhere … of Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to …

… chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … that people work with are actually alpha or gammaproteobacteria. They just have this very restricted niche. …