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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across … expressability: We are developing a Heterologous Expression Report Card toolkit (HERC-tk) to enable users to identify … and ever-improving, and to facilitate discussion and debate about the data. It is also a place where the community can …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes … fields, offering new approaches to address some of the world’s most pressing challenges. … Exploration of … … Please contact Emiley Eloe-Fadrosh regarding questions about our Metagenome Science Program. You can also direct …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important … to give her a proper introduction and a chance to talk about all the cool work she’s doing over at the University … on that. And we are working on making a great big BiG-SLiCE map out of all this. BiG-SLiCE is a comparative analysis …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … there, but we don’t have millions of molecules. In an ideal world, knowing that something can be produced, you know, you …
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … analysts and other technical experts Track, monitor and report analysis status to investigators Facilitate data … with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. Find out …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … or a fungus, but what we definitely see in the fungal world is, first of all, finding all the clusters. Yeah, you …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … National Microbiome Data Collective.        … Learn more about our work at the JGI:  …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … lot of crossover, where us genome miners get really jazzed about finding enzymes that do unusual or unprecedented … got you into natural products and got you excited about the world of natural products? ALISON NARAYAN: Oh where did it …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … of listeners downloading this from countries all over the world – as many from outside the US as inside – and so, …
Learn more
Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including … diversification and microbial diversity. Learn more about this work and further details on our Genomic …
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Products
… that your request is appropriate for that call. Learn more about the  average base outputs for each product. For custom requests not on this list, or to discuss experimental … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to … for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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