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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … the pandemic in Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun …
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GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … based on extensive computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … also be production, as we were mentioning before, of more complex secondary metabolites that an organism might want to …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from the human gut microbiome. Nature …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … biosynthetic gene clusters and genome size. And they’re so complex. There’s so much still to understand. Dan Udwary: …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … carbon dioxide and water into sugars and oxygen. Both sugarcane and corn share this photosynthetic pathway. … as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … phylogenetic relationships and to provide valuable reference genomes in under-populated areas of the tree of …
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Decoding Yellowstone’s Microbial Mats
Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … with three members, the interactions there are incredibly complex and some of them are synergistic, meaning that …
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