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… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, particularly as they relate to DOE …

… what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … and helping to concentrate it. But that’s the next project.  DAN: Thanks.  ALISON: We had talked a little bit … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …

… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy … to DOE for final approval.  Following DOE approval, project managers negotiate project specifics with PIs …

… 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …

… Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …

… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential … nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the …

… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … could be used to treat these highly resistant bacterial and fungal pathogens. And we’ve actually just wrapped up a year, … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can …

… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission … umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI capabilities, and also …