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Alabama A&M Interns Access An Abundance of Knowledge
… the roots of a plant in the soil. And I’m specifically working with a grass plant that’s similar to wheat and … to gain hands-on experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers can … In contrast, assembling the sugarcane genome was more challenging and took more than a decade because there were … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often …
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Crysten Blaby-Haas
… working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein National Research Service Award (NRSA) … algae, and plants, while focusing on understanding the evolution and function of proteins involved in metal …
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Katherine Louie
… capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform … of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k … for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds …
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First Monoploid Reference Sequence of Sugarcane
… to develop sustainable alternative fuels. While more than half of the ethanol produced worldwide comes from the United … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … A C4 plant like sorghum and maize, sugarcane can grow on nutrient-poorer soils and does not need to be planted …
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Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
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The Tale of a Neglected Energy Source: Elevated Hydrogen Exposure Affects both Microbial Diversity and Function in Soil
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Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface
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Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States)
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The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont
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Microbial Community Structure and Functional Potential in Cultivated and Native Tallgrass Prairie Soils of the Midwestern United States
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