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JGI announces 2024 New Investigator portfolio
… is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have …
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Gotta Catch 'Em Gall
In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for … recycling. But some hungry insects can digest plastic. So researchers are taking a look at how these critters process …
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he … Spring Harbor Asia 2011-  Board of Directors, The Genome Partnership 2008- Co-Chair, “Advances in Genome Biology & …
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Modulation of sensory perception by hydrogen peroxide enables Caenorhabditis elegans to find a niche that provides both food and protection from hydrogen peroxide
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Hiroshi Otani
Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … metabolism and development in actinomycetes. He is particularly interested in understanding how, when and why …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While … CRAGE to domesticate target microbes, users of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … known methanogens. With the help of this information, the researchers found evolutionary relationships between …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … genomes, but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC … of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … of light crude oil spilling into the Gulf of Mexico, researchers at Lawrence Berkeley National Laboratory … and ecosystems.” Building off multiple collaborations, Lab researchers working with the JGI successfully simulated how …
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