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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral EcoGenomics” community to foster … and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, and functionally explore …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …
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Clarence Le
… researcher who identifies and analyzes novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the …
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