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Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … to have with a faster-cooking bean itself.” The original reference genome yielded what are now widely-used molecular …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … genomes and their evolution could provide strategies for converting plant waste into sugars for  biofuel …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … for metagenomic sequencing. A study  recently published in  Microbiome shows that the way nutrients flow through the …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became Director of Research at …
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Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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Pyrophosphate-free glycolysis in Clostridium thermocellum increases both thermodynamic driving force and ethanol titers
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … Zengler K et al . EcoFAB: Advancing microbiome science through standardized fabricated …
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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online using the …
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