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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
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Population ecology and biogeochemical implications of ssDNA and dsDNA viruses along a permafrost thaw gradient
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Olpidium, The Key to the Origin of Terrestrial Fungi
… much damage to the hosts, but they are carriers of several viruses (e.g., Lettuce big-vein associated virus LBVaV; … Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … to convert food into energy. However, in environments with little or no oxygen, life had found other ways to …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have … pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … leveraged the DOE Office of Science facilities in complementary ways to investigate this protein domain. …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are … at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find … these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of …
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Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
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The Chlorella variabilis NC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex
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