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Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

… how microbes can colonize plant roots, focusing on genetic components required for effective colonization. In … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …

… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … sort of homogeneous medium. In reality, it’s not — there is variation of nutrients, temperatures, and other … to address some of the most pressing challenges of our time. For more information, please visit  …

Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of Rhode Island, … (1996) … List available on Google Scholar … Education … Publications …

… 2017 Summer Interns Share Highlights of their time at the JGI …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …

Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

To expand access to integrated data, improve tools and infrastructure as well as … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working … new skills needed for their PhD research. And for the first time in this program’s history, two interns returned to … Graphs: Approaches for Complete Categorization of Genomic Variations … Comparative and Functional Genomic Analysis of …

A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … their tool before felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was … sgRNAs) appeared to be rife with false negatives: that time, the team only found 359 genes to be essential. The …

Over the years, hundreds of interns have come to the JGI from all parts of the globe to … way or another, they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an …