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Chordate evolution and the three-phylum system
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Domain shuffling and the evolution of vertebrates
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Genomics of the origin and evolution of Citrus
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “By offering Stable Isotope …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. At these vents, and … of Science User Facility at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants … and Systems Biology Division of Lawrence Berkeley National Laboratory (Berkeley Lab). He completed this work with …
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An Integrated Dataset to Understand Ecosystem Interaction
… well as the soil surrounding their roots (known as the rhizosphere), researchers hope this massive and integrated data set will help identify how different elements of the ecosystem interact and respond to changes in the … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of this information — 318 …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … viruses run rampant, capable of infecting different host species? Or, do they tend to specialize, infecting just a … primarily relied on culturing virus and host pairs in the laboratory to study their interactions. This work,  recently …
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