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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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Olpidium, The Key to the Origin of Terrestrial Fungi
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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JGI on the 2021 Highly Cited Researchers List
JGI staff who mentored students this past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science Graduate Student Research (SCGSR) Program. (Watch … that anaerobic fungi from herbivore poop might be a new source of novel compounds to help bolster the bioeconomy. …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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JGI-UC Merced Interns Share Their 2021 Experiences
JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional … genomics and to help foster a diverse future workforce in science. To learn more about each intern’s experience during … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… large and giant. In a recent study  published in the journal  Nature , a team led by researchers at the U.S. … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Rex Malmstrom
His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Metagenomes from Experimental Hydrologic Manipulation of Restored Coastal Plain Wetland Soils (Tyrell County, North Carolina)
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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