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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to …
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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses … prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely …
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Toward More Efficient Artificial Photosynthesis
… current natural processes and use it as a sustainable resource for making high-value bioproducts. As a step toward … in the atmosphere. The work was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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JGI announces second round of 2023 New Investigator awardees
… Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have … proposals — through the New Investigator call under our Community Science Program .  Below find a list of the second …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Crops as Tough as World Cup Turf
… In our warming world, we’ll need corn, sorghum and other crops …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after … of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will … of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of … ecosystems across various biological contexts. The program fosters intimate, dynamic interactions, offering an …
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Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities
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